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Challenging the problematic detection of clostridial isolates causing late-blowing defect with MALDI–TOF MS

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dc.creator Ertürkmen, Pelin
dc.creator Öner, Zübeyde
dc.date 2023-02-01T00:00:00Z
dc.date.accessioned 2025-02-25T10:23:37Z
dc.date.available 2025-02-25T10:23:37Z
dc.identifier 6940a19a-a1e8-4c73-9a74-46977f3e4baf
dc.identifier 10.17221/199/2022-cjfs
dc.identifier https://avesis.sdu.edu.tr/publication/details/6940a19a-a1e8-4c73-9a74-46977f3e4baf/oai
dc.identifier.uri http://acikerisim.sdu.edu.tr/xmlui/handle/123456789/100012
dc.description <p><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">The present study aimed to&nbsp;evaluate the&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">Clostridium</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">&nbsp;spp. counts in&nbsp;corn silage, raw milk and Kaşar cheese and to&nbsp;identify the clostridial isolates causing a&nbsp;late-blowing defect (LBD) potential using matrix-assisted laser desorption-ionization-time of&nbsp;flight mass spectrometry (MALDI-TOF&nbsp;MS). Lactate-fermenting clostridial spores (LFCS) were determined by&nbsp;the most probable number method (MPN) in&nbsp;14&nbsp;samples of&nbsp;corn silage, 12&nbsp;samples of&nbsp;raw milk and 20&nbsp;samples of&nbsp;Kaşar cheese. 181 isolates were obtained from MPN gas-positive tubes. Gram staining, catalase and oxidase activity, anaerobic development tests and Scanning Electron Microscopy (SEM) imaging showed that 95&nbsp;isolates were typical clostridial bacteria. Sixty-six isolates could maintain viability during the passage and stock stages. A&nbsp;confirmatory identification technique was then performed using MALDI-TOF&nbsp;MS. The results revealed that (49&nbsp;out of&nbsp;66&nbsp;isolates) of&nbsp;bacteria were correctly identified as&nbsp;38&nbsp;(77.55%)&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">Clostridium</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">sporogenes</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">, 6&nbsp;(12.24%)&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">Clostridium</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">butyricum</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">, 3&nbsp;(6.12%)&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">Clostridium</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">beijerinckii</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">, 1&nbsp;(2.04%)&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">Clostridium</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">bifermentans</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">&nbsp;and 1&nbsp;(2.04%)&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">Clostridium</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">&nbsp;</span><i style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">sartagoforme.</i><span style="color: rgb(85, 85, 85); font-family: Calibri, Candara, Segoe, &quot;Segoe UI&quot;, Optima, Arial, sans-serif; font-size: medium; text-align: justify;">&nbsp;This study determined that clostridial isolates that cause LBD can be&nbsp;identified successfully and quickly by&nbsp;MALDI-TOF&nbsp;MS, a&nbsp;novel method for detecting anaerobic bacteria.</span><br></p>
dc.language tur
dc.rights info:eu-repo/semantics/openAccess
dc.title Challenging the problematic detection of clostridial isolates causing late-blowing defect with MALDI–TOF MS
dc.type info:eu-repo/semantics/article


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