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Determination of the interactions of a schiff base with different targets via molecular docking and cytotoxic activity studies

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dc.creator Bayar, İrem
dc.creator AKKOÇ, Senem
dc.creator TÜRKMENOĞLU, BURÇİN
dc.creator KÖKBUDAK, ZÜLBİYE
dc.date 2024-11-01T00:00:00Z
dc.date.accessioned 2025-02-25T10:23:38Z
dc.date.available 2025-02-25T10:23:38Z
dc.identifier 69ec980a-3dc1-475f-93ec-30405643211f
dc.identifier 10.1016/j.jics.2024.101401
dc.identifier https://avesis.sdu.edu.tr/publication/details/69ec980a-3dc1-475f-93ec-30405643211f/oai
dc.identifier.uri http://acikerisim.sdu.edu.tr/xmlui/handle/123456789/100024
dc.description The pyrimidine nucleus is a vital pharmacophore that exhibits excellent pharmacological activity. A Schiff base containing a pyrimidine nucleus was obtained in two steps. This compound was assessed on the human prostate (PC3) and liver (HepG2) cancer cell lines using the MTT method. The prepared compound 3 was determined to have a high cytotoxic effect towards prostate cancer with an IC50 value of 9.32 μM. Since experimental prostate and liver cancer studies were examined, the molecular docking study's target structures were determined accordingly. In molecular docking studies, compound 3 interacted in silico with the crystal structure of the human HER2 kinase domain (PDB Id: 3PP0), the crystal structure of VEGFR-2 (PDB Id: 4ASD), and the crystal structure of EGFR tyrosine kinase (PDB Id: 4HJO), respectively. As a result of these interactions, binding energy values were calculated, and binding modes were determined. Additional in vitro and in vivo experiments targeting other cancer cell lines will provide deeper insight into the anticancer spectrum of this compound and new studies on this compound will be planned in the following years. Furthermore, optimizing and studying such pyrimidine-based Schiff base compounds for improved selectivity and potency against prostate cancer is also considered to be valuable as it may increase the potential to capture potential drug candidates.
dc.language eng
dc.rights info:eu-repo/semantics/closedAccess
dc.title Determination of the interactions of a schiff base with different targets via molecular docking and cytotoxic activity studies
dc.type info:eu-repo/semantics/article


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