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Ancient genetic bottleneck and Plio-Pleistocene climatic changes imprinted the phylobiogeography of European Black Pine populations

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dc.creator Bogunic, Faruk
dc.creator Kamary, Salim
dc.creator Tsarev, Anatoly
dc.creator Naydenov, Krassimir D.
dc.creator Naydenov, Michel K.
dc.creator Alexandrov, Alexander
dc.creator Vasilevski, Kole
dc.creator Hinkov, Georgi
dc.creator Matevski, Vlado
dc.creator Nikolic, Biljana
dc.creator Goudiaby, Venceslas
dc.creator Riegert, Dave
dc.creator Paitaridou, Despina
dc.creator Christou, Andreas
dc.creator Goia, Irina
dc.creator Carcaillet, Christopher
dc.creator Escudero Alcantara, Adrian
dc.creator TÜRE, CENGİZ
dc.creator Gulcu, Suleyman
dc.creator Gyuleva, Veselka
dc.creator Bojovic, Srdjan
dc.creator Peruzzi, Lorenzo
dc.date 2017-12-01T00:00:00Z
dc.date.accessioned 2021-12-03T11:20:05Z
dc.date.available 2021-12-03T11:20:05Z
dc.identifier 370f901a-2167-4808-a660-c7ec43163a07
dc.identifier 10.1007/s10342-017-1069-9
dc.identifier https://avesis.sdu.edu.tr/publication/details/370f901a-2167-4808-a660-c7ec43163a07/oai
dc.identifier.uri http://acikerisim.sdu.edu.tr/xmlui/handle/123456789/90889
dc.description The historical changes in European Black Pine population size across the whole natural distribution in Europe and Asia Minor were analyzed facing the Plio-Pleistocene climatic fluctuations. Thirteen chloroplast SSRs and SNPs markers have been studied under the assumptions of "neutral evolution." Populations and meta-populations had different histories of migration routes, and they were strongly affected by complex patterns of isolation, fragmentation, speciation, expansion (1.88-4.28 Ma), purification selection (2.09-21.41 Ma) and bottleneck (1.85-21.76 Ma). A significant number of populations (min. 29-41%) were in equilibrium for very long periods. Generally, the bottleneck revealed by chloroplast DNA is weaker than the bottleneck revealed by nuclear DNA. The N (e) immediately after the bottleneck reaches between 1820 and 3640 individuals. Generally, the historical effective population sizes shrink significantly for the Tertiary period from 10-15 up to 2.5 Ma in Western Europe (by 82%), followed by Asia Minor (69%) and the Balkan Peninsula (28%), likely resulting from important climatic changes. The rates and frequencies of stepwise westwards migration waves have been not sufficient to prevent isolation between the meta-populations and to suppress "sympatric speciation." The migration was weak for the Pliocene, but was maximal for the Pleistocene, and finally silent for the present interglacial period, namely the Holocene.
dc.language eng
dc.rights info:eu-repo/semantics/closedAccess
dc.title Ancient genetic bottleneck and Plio-Pleistocene climatic changes imprinted the phylobiogeography of European Black Pine populations
dc.type info:eu-repo/semantics/article


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